PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00519g00510.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB_related
Protein Properties Length: 127aa    MW: 14985.4 Da    PI: 10.3155
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00519g00510.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-08549345
                              SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
           Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                              +WT  Ed l++++  +++     +W +I  +++  +t++q++s++ 
  Peaxi162Scf00519g00510.1  5 SWTRYEDILFKQVLILYPEQivdRWQLITDHIP-DKTPEQIISHYD 49
                              7*****************99*************.**********95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.298156IPR017930Myb domain
SMARTSM007171.6E-4254IPR001005SANT/Myb domain
SuperFamilySSF466895.08E-10463IPR009057Homeodomain-like
PfamPF002492.5E-7450IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.6E-4452IPR009057Homeodomain-like
CDDcd001677.27E-7548No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MSTTSWTRYE DILFKQVLIL YPEQIVDRWQ LITDHIPDKT PEQIISHYDD LVHDVLEIVS  60
GRVEPPRPQH KWPVILKYFI RQQAMKKKRK RSSIHDITTA VNTGNLLEVQ RQARIGKLKA  120
IRGNFSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18691KKRKRS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009795456.11e-24PREDICTED: transcription factor DIVARICATA-like
RefseqXP_016473251.11e-24PREDICTED: transcription factor DIVARICATA-like
TrEMBLK4D4T39e-23K4D4T3_SOLLC; Uncharacterized protein
STRINGSolyc11g006720.1.13e-22(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.11e-16MYB family protein